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LOC117413599 angiopoietin-2 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117413599, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117413599
Gene description
angiopoietin-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
Also known as
angpt2b
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Genomic context

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See LOC117413599 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 25 NC_081213.1 (1116628..1132640, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 25 NC_048347.1 (13288169..13302774)

Chromosome 25 - NC_081213.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117963972 Neighboring gene CUB and sushi domain-containing protein 1-like Neighboring gene trafficking protein particle complex subunit 3 Neighboring gene collagen alpha-2(VIII) chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Tie signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
angiopoietin-2
Names
angiopoietin 2b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081213.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    1116628..1132640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058999603.1 → XP_058855586.1  angiopoietin-2

Nucleotide Protein
Heading Accession and Version

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