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LOC117412652 C1GALT1-specific chaperone 1-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117412652, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117412652
Gene description
C1GALT1-specific chaperone 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
Also known as
c1galt1c1
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Genomic context

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See LOC117412652 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 16 NC_081204.1 (30377529..30383427)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 20 NC_048342.1 (3897036..3901878, complement)

Chromosome 16 - NC_081204.1Genomic Context describing neighboring genes Neighboring gene protein eva-1 homolog C-like Neighboring gene chloride intracellular channel protein 2-like Neighboring gene malignant T-cell-amplified sequence 1 Neighboring gene cullin-4B Neighboring gene lysosome-associated membrane glycoprotein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1-like
Names
C1GALT1-specific chaperone 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081204.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    30377529..30383427
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034902738.2 → XP_034758629.2  C1GALT1-specific chaperone 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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