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LOC117411243 artemin-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117411243, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117411243
Gene description
artemin-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117411243 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 10 NC_081198.1 (6182717..6202471)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 10 NC_048332.1 (5960424..5978189)

Chromosome 10 - NC_081198.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 4A Neighboring gene CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like Neighboring gene prostaglandin E2 receptor EP4 subtype Neighboring gene ATP-dependent DNA helicase PIF1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glial cell-derived neurotrophic factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
artemin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081198.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    6182717..6202471
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059031595.1 → XP_058887578.1  artemin-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases