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map4k3a mitogen-activated protein kinase kinase kinase kinase 3a [ Acipenser ruthenus (sterlet) ]

Gene ID: 117411124, updated on 19-Mar-2024

Summary

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Gene symbol
map4k3a
Gene description
mitogen-activated protein kinase kinase kinase kinase 3a
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
Orthologs
zebrafish all
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Genomic context

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See map4k3a in Genome Data Viewer
Location:
chromosome: 6
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 6 NC_081194.1 (15116724..15196239, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 6 NC_048328.1 (15218878..15296577, complement)

Chromosome 6 - NC_081194.1Genomic Context describing neighboring genes Neighboring gene son of sevenless homolog 1-like Neighboring gene retinol dehydrogenase 13-like Neighboring gene U5 spliceosomal RNA Neighboring gene transmembrane protein 178A-like Neighboring gene U5 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MAP kinase kinase kinase kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitogen-activated protein kinase kinase kinase kinase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081194.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    15116724..15196239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034018290.3 → XP_033874181.1  mitogen-activated protein kinase kinase kinase kinase 3 isoform X4

    Conserved Domains (2) summary
    smart00036
    Location:563 → 876
    CNH; Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2
    cd06613
    Location:16 → 274
    STKc_MAP4K3_like; Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases

  2. XM_059025067.1 → XP_058881050.1  mitogen-activated protein kinase kinase kinase kinase 3 isoform X3

  3. XM_034018293.3 → XP_033874184.1  mitogen-activated protein kinase kinase kinase kinase 3 isoform X2

    Conserved Domains (2) summary
    smart00036
    Location:542 → 855
    CNH; Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2
    cd06613
    Location:16 → 274
    STKc_MAP4K3_like; Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases

  4. XM_034018292.3 → XP_033874183.1  mitogen-activated protein kinase kinase kinase kinase 3 isoform X1

    Conserved Domains (2) summary
    smart00036
    Location:546 → 859
    CNH; Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2
    cd06613
    Location:16 → 274
    STKc_MAP4K3_like; Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases
Nucleotide Protein
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