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LOC117410967 heparan sulfate glucosamine 3-O-sulfotransferase 5-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117410967, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117410967
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117410967 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 6 NC_081194.1 (77271109..77348533, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 6 NC_048328.1 (79282753..79359168, complement)

Chromosome 6 - NC_081194.1Genomic Context describing neighboring genes Neighboring gene myristoylated alanine-rich C-kinase substrate-like Neighboring gene histone deacetylase 2 Neighboring gene uncharacterized LOC131737395 Neighboring gene tyrosine-protein kinase SRK2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081194.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    77271109..77348533 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034017944.3 → XP_033873835.3  heparan sulfate glucosamine 3-O-sulfotransferase 5-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases