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LOC117409943 voltage-dependent calcium channel gamma-8 subunit [ Acipenser ruthenus (sterlet) ]

Gene ID: 117409943, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117409943
Gene description
voltage-dependent calcium channel gamma-8 subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
Also known as
cacng8b
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Genomic context

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See LOC117409943 in Genome Data Viewer
Location:
chromosome: 60
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 60 NC_081248.1 (2284010..2305012, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 45 NC_048367.1 (4604693..4627886, complement)

Chromosome 60 - NC_081248.1Genomic Context describing neighboring genes Neighboring gene ER lumen protein-retaining receptor 1 Neighboring gene voltage-dependent calcium channel gamma-6 subunit-like Neighboring gene voltage-dependent calcium channel gamma-7 subunit-like Neighboring gene protein kinase C alpha type-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter receptor internalization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter receptor transport, postsynaptic endosome to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postsynaptic neurotransmitter receptor diffusion trapping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of AMPA receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmission of nerve impulse IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent calcium channel gamma-8 subunit
Names
calcium channel, voltage-dependent, gamma subunit 8b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081248.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    2284010..2305012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034016263.3 → XP_033872154.3  voltage-dependent calcium channel gamma-8 subunit

  2. XM_034016259.3 → XP_033872150.3  voltage-dependent calcium channel gamma-8 subunit

  3. XM_034016260.3 → XP_033872151.3  voltage-dependent calcium channel gamma-8 subunit

  4. XM_034016261.3 → XP_033872152.3  voltage-dependent calcium channel gamma-8 subunit

  5. XM_034016262.3 → XP_033872153.3  voltage-dependent calcium channel gamma-8 subunit

Nucleotide Protein
Heading Accession and Version

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