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LOC117409395 colorectal mutant cancer protein-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117409395, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117409395
Gene description
colorectal mutant cancer protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117409395 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 1 NC_081189.1 (26487692..26629763)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 1 NC_048323.1 (105819518..105959168)

Chromosome 1 - NC_081189.1Genomic Context describing neighboring genes Neighboring gene small conductance calcium-activated potassium channel protein 2-like Neighboring gene 3'-5' RNA helicase YTHDC2-like Neighboring gene m7GpppN-mRNA hydrolase Neighboring gene receptor expression-enhancing protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
colorectal mutant cancer protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081189.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    26487692..26629763
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059022740.1 → XP_058878723.1  colorectal mutant cancer protein-like isoform X2

  2. XM_059022737.1 → XP_058878720.1  colorectal mutant cancer protein-like isoform X1

  3. XM_059022745.1 → XP_058878728.1  colorectal mutant cancer protein-like isoform X3

  4. XM_059022751.1 → XP_058878734.1  colorectal mutant cancer protein-like isoform X4

Nucleotide Protein
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