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LOC117408407 cerberus-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117408407, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117408407
Gene description
cerberus-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117408407 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 2 NC_081190.1 (72441471..72443268, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 2 NC_048324.1 (65269247..65270788, complement)

Chromosome 2 - NC_081190.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131696689 Neighboring gene cytoplasmic aconitate hydratase-like Neighboring gene uncharacterized LOC131701633 Neighboring gene uncharacterized LOC131696835

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables morphogen activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in determination of heart left/right asymmetry IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sequestering of BMP in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction involved in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cerberus-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081190.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    72441471..72443268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034013367.3 → XP_033869258.1  cerberus-like

    UniProtKB/TrEMBL
    A0A444TZS7
    Conserved Domains (1) summary
    pfam03045
    Location:88 → 187
    DAN; DAN domain
Nucleotide Protein
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