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LOC117406456 carbohydrate sulfotransferase 7-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117406456, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117406456
Gene description
carbohydrate sulfotransferase 7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117406456 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 8 NC_081196.1 (63316507..63326089, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 8 NC_048330.1 (62900090..62909909)

Chromosome 8 - NC_081196.1Genomic Context describing neighboring genes Neighboring gene protein XRP2-like Neighboring gene sodium/hydrogen exchanger 7-like Neighboring gene gamma-tubulin complex component 5-like Neighboring gene cytoplasmic FMR1-interacting protein 1 homolog Neighboring gene fibronectin type III domain-containing protein 9-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081196.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    63316507..63326089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034010501.3 → XP_033866392.1  carbohydrate sulfotransferase 7-like

    Conserved Domains (1) summary
    cl21551
    Location:232 → 404
    Sulfotransfer_3; Sulfotransferase family

RNA

  1. XR_004544966.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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