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LOC117405040 procollagen galactosyltransferase 2 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117405040, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117405040
Gene description
procollagen galactosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
Also known as
colgalt2
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Genomic context

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See LOC117405040 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 10 NC_081198.1 (173755..195752)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 10 NC_048332.1 (179615..200219)

Chromosome 10 - NC_081198.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C1orf21 homolog Neighboring gene TSEN15 tRNA splicing endonuclease subunit Neighboring gene ral guanine nucleotide dissociation stimulator-like 1 Neighboring gene peroxiredoxin-6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2
Names
collagen beta(1-O)galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081198.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    173755..195752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034007825.3 → XP_033863716.3  procollagen galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A662YL38

  2. XM_059031377.1 → XP_058887360.1  procollagen galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A662YL38
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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