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LOC117404104 polypeptide N-acetylgalactosaminyltransferase 3-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117404104, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117404104
Gene description
polypeptide N-acetylgalactosaminyltransferase 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117404104 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 10 NC_081198.1 (41996553..42008077, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 10 NC_048332.1 (38914296..38925803, complement)

Chromosome 10 - NC_081198.1Genomic Context describing neighboring genes Neighboring gene xin actin-binding repeat-containing protein 2-like Neighboring gene cysteine/serine-rich nuclear protein 3-like Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene sodium channel protein type 2 subunit alpha-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081198.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    41996553..42008077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059032287.1 → XP_058888270.1  polypeptide N-acetylgalactosaminyltransferase 3-like isoform X2

  2. XM_034006808.3 → XP_033862699.2  polypeptide N-acetylgalactosaminyltransferase 3-like isoform X1

Nucleotide Protein
Heading Accession and Version

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