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LOC117402611 disheveled-associated activator of morphogenesis 2-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117402611, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117402611
Gene description
disheveled-associated activator of morphogenesis 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117402611 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 5 NC_081193.1 (78019893..78139733, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 5 NC_048327.1 (10866792..10982098)

Chromosome 5 - NC_081193.1Genomic Context describing neighboring genes Neighboring gene fos-related antigen 2-like Neighboring gene molybdenum cofactor biosynthesis protein 1 Neighboring gene kinesin-like protein KIF6 Neighboring gene potassium channel subfamily K member 16-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of oligodendrocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
disheveled-associated activator of morphogenesis 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081193.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    78019893..78139733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059024559.1 → XP_058880542.1  disheveled-associated activator of morphogenesis 2-like isoform X1

  2. XM_034003941.3 → XP_033859832.1  disheveled-associated activator of morphogenesis 2-like isoform X2

    Conserved Domains (3) summary
    pfam06367
    Location:231 → 435
    Drf_FH3; Diaphanous FH3 Domain
    pfam02181
    Location:599 → 974
    FH2; Formin Homology 2 Domain
    pfam06371
    Location:41 → 228
    Drf_GBD; Diaphanous GTPase-binding Domain

  3. XM_034003940.3 → XP_033859831.1  disheveled-associated activator of morphogenesis 2-like isoform X1

    Conserved Domains (3) summary
    pfam06367
    Location:231 → 435
    Drf_FH3; Diaphanous FH3 Domain
    pfam02181
    Location:599 → 984
    FH2; Formin Homology 2 Domain
    pfam06371
    Location:41 → 228
    Drf_GBD; Diaphanous GTPase-binding Domain

  4. XM_034003939.2 → XP_033859830.1  disheveled-associated activator of morphogenesis 2-like isoform X1

    Conserved Domains (3) summary
    pfam06367
    Location:231 → 435
    Drf_FH3; Diaphanous FH3 Domain
    pfam02181
    Location:599 → 984
    FH2; Formin Homology 2 Domain
    pfam06371
    Location:41 → 228
    Drf_GBD; Diaphanous GTPase-binding Domain
Nucleotide Protein
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