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dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117402446, updated on 19-Mar-2024

Summary

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Gene symbol
dnph1
Gene description
2'-deoxynucleoside 5'-phosphate N-hydrolase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
Orthologs
human zebrafish all
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Genomic context

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See dnph1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 5 NC_081193.1 (23458278..23461758)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 5 NC_048327.1 (65547261..65551282, complement)

Chromosome 5 - NC_081193.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 318-like Neighboring gene serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit Neighboring gene cullin-9-like Neighboring gene serum response factor-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribonucleoside 5'-monophosphate N-glycosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deoxyribonucleoside monophosphate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2'-deoxynucleoside 5'-phosphate N-hydrolase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081193.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    23458278..23461758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034003582.3 → XP_033859473.1  2'-deoxynucleoside 5'-phosphate N-hydrolase 1

    UniProtKB/TrEMBL
    A0A444UJG5
    Conserved Domains (1) summary
    cl23749
    Location:7 → 111
    TIR_2; TIR domain
Nucleotide Protein
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