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LOC117401689 mitochondrial carnitine/acylcarnitine carrier protein-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117401689, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117401689
Gene description
mitochondrial carnitine/acylcarnitine carrier protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117401689 in Genome Data Viewer
Location:
chromosome: 55
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 55 NC_081243.1 (2316195..2349274)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 51 NC_048373.1 (3051095..3084810)

Chromosome 55 - NC_081243.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA11 Neighboring gene necdin-like 2 Neighboring gene rab GDP dissociation inhibitor alpha Neighboring gene tafazzin-like Neighboring gene V-type proton ATPase subunit S1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081243.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    2316195..2349274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034002484.3 → XP_033858375.2  mitochondrial carnitine/acylcarnitine carrier protein-like

Nucleotide Protein
Heading Accession and Version

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