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LOC117400667 R-spondin-2-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117400667, updated on 21-Aug-2023

Summary

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Gene symbol
LOC117400667
Gene description
R-spondin-2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117400667 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 4 NC_081192.1 (42137983..42211483)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 3 NC_048325.1 (65844619..65917578, complement)

Chromosome 4 - NC_081192.1Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 2 Neighboring gene eukaryotic translation initiation factor 3 subunit E-B Neighboring gene angiopoietin-1-like Neighboring gene actin-binding Rho-activating protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
R-spondin-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081192.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    42137983..42211483
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034000933.3 → XP_033856824.1  R-spondin-2-like isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40 → 140
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:144 → 197
    TSP1_spondin; Spondin-like TSP1 domain

  2. XM_034000934.3 → XP_033856825.1  R-spondin-2-like isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:1 → 73
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:77 → 130
    TSP1_spondin; Spondin-like TSP1 domain
Nucleotide Protein
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