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LOC117400399 dnaJ homolog subfamily B member 6-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117400399, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117400399
Gene description
dnaJ homolog subfamily B member 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117400399 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 4 NC_081192.1 (103853808..103902949, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 3 NC_048325.1 (3640554..3687526)

Chromosome 4 - NC_081192.1Genomic Context describing neighboring genes Neighboring gene condensin-2 complex subunit G2-like Neighboring gene receptor-type tyrosine-protein phosphatase N2-like Neighboring gene ubiquitin-protein ligase E3C-like Neighboring gene motor neuron and pancreas homeobox 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081192.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    103853808..103902949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059023313.1 → XP_058879296.1  dnaJ homolog subfamily B member 6-like isoform X2

  2. XM_059023312.1 → XP_058879295.1  dnaJ homolog subfamily B member 6-like isoform X1

  3. XM_034913750.2 → XP_034769641.2  dnaJ homolog subfamily B member 6-like isoform X3

  4. XM_034913754.2 → XP_034769645.2  dnaJ homolog subfamily B member 6-like isoform X5

    UniProtKB/TrEMBL
    A0A662YNS3

  5. XM_059023314.1 → XP_058879297.1  dnaJ homolog subfamily B member 6-like isoform X4

    UniProtKB/TrEMBL
    A0A662YNS3

  6. XM_059023315.1 → XP_058879298.1  dnaJ homolog subfamily B member 6-like isoform X6

  7. XM_059023316.1 → XP_058879299.1  dnaJ homolog subfamily B member 6-like isoform X7

    UniProtKB/TrEMBL
    A0A662YNS3
Nucleotide Protein
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