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LOC117399872 protein APCDD1-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117399872, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117399872
Gene description
protein APCDD1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117399872 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 4 NC_081192.1 (14181371..14202592, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 3 NC_048325.1 (92150179..92171209)

Chromosome 4 - NC_081192.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rab-31-like Neighboring gene vesicle-associated membrane protein-associated protein A-like Neighboring gene uncharacterized LOC131736824 Neighboring gene uncharacterized LOC131736825 Neighboring gene gamma-soluble NSF attachment protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein APCDD1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081192.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    14181371..14202592 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033999288.3 → XP_033855179.3  protein APCDD1-like

Nucleotide Protein
Heading Accession and Version

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