U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117399277 beta-1,4-galactosyltransferase 6 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117399277, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC117399277
Gene description
beta-1,4-galactosyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117399277 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 4 NC_081192.1 (17638549..17682585, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 3 NC_048325.1 (88534207..88578127)

Chromosome 4 - NC_081192.1Genomic Context describing neighboring genes Neighboring gene desmoglein-2.1-like Neighboring gene transthyretin-like Neighboring gene uncharacterized LOC131737029 Neighboring gene trafficking protein particle complex subunit 8-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,4-galactosyltransferase 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081192.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    17638549..17682585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033998366.3 → XP_033854257.1  beta-1,4-galactosyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A444U3S3
    Conserved Domains (1) summary
    cd00899
    Location:155 → 371
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_059022104.1 → XP_058878087.1  beta-1,4-galactosyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A444U3S3

  3. XM_059022105.1 → XP_058878088.1  beta-1,4-galactosyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A444U3S3

  4. XM_033998365.3 → XP_033854256.1  beta-1,4-galactosyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A444U3S3
    Conserved Domains (1) summary
    cd00899
    Location:155 → 371
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  5. XM_034920575.2 → XP_034776466.1  beta-1,4-galactosyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A444U3S3
    Conserved Domains (1) summary
    cd00899
    Location:155 → 327
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases