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LOC117398603 RAS guanyl-releasing protein 2-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117398603, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117398603
Gene description
RAS guanyl-releasing protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117398603 in Genome Data Viewer
Location:
chromosome: 51
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 51 NC_081239.1 (764286..794819)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 55 NC_048377.1 (2494135..2521311, complement)

Chromosome 51 - NC_081239.1Genomic Context describing neighboring genes Neighboring gene splicing factor 1 Neighboring gene glycogen phosphorylase, muscle form-like Neighboring gene neurexin-2-like Neighboring gene uncharacterized LOC131722705 Neighboring gene mitogen-activated protein kinase kinase kinase 11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RAS guanyl-releasing protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081239.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    764286..794819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034915312.2 → XP_034771203.1  RAS guanyl-releasing protein 2-like

    Conserved Domains (4) summary
    cd06224
    Location:11 → 124
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    smart00147
    Location:147 → 384
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd00051
    Location:423 → 474
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cd20808
    Location:491 → 542
    C1_RASGRP; protein kinase C conserved region 1 (C1 domain) found in the RAS guanyl-releasing protein (RASGRP) family
Nucleotide Protein
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