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LOC117397161 kin of IRRE-like protein 3 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117397161, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117397161
Gene description
kin of IRRE-like protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117397161 in Genome Data Viewer
Location:
chromosome: 40
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 40 NC_081228.1 (5631045..5790330)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 44 NC_048366.1 (5658304..5816574)

Chromosome 40 - NC_081228.1Genomic Context describing neighboring genes Neighboring gene protein c-ets-1-B Neighboring gene somatolactin Neighboring gene phospholipid transfer protein C2CD2L-like Neighboring gene histone H2AX

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081228.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    5631045..5790330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059010085.1 → XP_058866068.1  kin of IRRE-like protein 3 isoform X2

  2. XM_059010084.1 → XP_058866067.1  kin of IRRE-like protein 3 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases