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LOC117395055 secreted frizzled-related sequence protein 4-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117395055, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117395055
Gene description
secreted frizzled-related sequence protein 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117395055 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 3 NC_081191.1 (88922862..88928699, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 4 NC_048326.1 (18625712..18631441)

Chromosome 3 - NC_081191.1Genomic Context describing neighboring genes Neighboring gene probable G-protein coupled receptor 141 Neighboring gene vacuolar protein sorting-associated protein 8 homolog Neighboring gene mammalian ependymin-related protein 1-like Neighboring gene uncharacterized LOC131732942

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related sequence protein 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081191.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    88922862..88928699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033993907.3 → XP_033849798.1  secreted frizzled-related sequence protein 4-like

    UniProtKB/TrEMBL
    A0A662YSW1
    Conserved Domains (2) summary
    cl02447
    Location:19 → 145
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
    cl02512
    Location:188 → 294
    NTR_like; NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the ...
Nucleotide Protein
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