U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117394552 aspartyl/asparaginyl beta-hydroxylase-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117394552, updated on 26-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117394552
Gene description
aspartyl/asparaginyl beta-hydroxylase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117394552 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 3 NC_081191.1 (85644530..85659298, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 4 NC_048326.1 (22049068..22064018)

Chromosome 3 - NC_081191.1Genomic Context describing neighboring genes Neighboring gene clavesin-1-like Neighboring gene clavesin-1 Neighboring gene aspartyl/asparaginyl beta-hydroxylase-like Neighboring gene uncharacterized LOC131724965 Neighboring gene uncharacterized LOC131724968

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
aspartyl/asparaginyl beta-hydroxylase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081191.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    85644530..85659298 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059021001.1 → XP_058876984.1  aspartyl/asparaginyl beta-hydroxylase-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases