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LOC117394166 tumor necrosis factor receptor superfamily member 16-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117394166, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117394166
Gene description
tumor necrosis factor receptor superfamily member 16-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117394166 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 3 NC_081191.1 (43273858..43283908, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 4 NC_048326.1 (64758232..64768379)

Chromosome 3 - NC_081191.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117394755 Neighboring gene histone-lysine N-methyltransferase SETD2-like Neighboring gene protein Mis18-alpha-like Neighboring gene neurobeachin-like protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables death receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nerve growth factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member 16-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081191.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    43273858..43283908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033992202.3 → XP_033848093.3  tumor necrosis factor receptor superfamily member 16-like

Nucleotide Protein
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