U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117369305 translocating chain-associated membrane protein 1-like 1 [ Geotrypetes seraphini ]

Gene ID: 117369305, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117369305
Gene description
translocating chain-associated membrane protein 1-like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117369305 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 11 NC_047094.1 (112493067..112579489, complement)

Chromosome 11 - NC_047094.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117368868 Neighboring gene sulfatase 2 Neighboring gene nuclear receptor coactivator 3 Neighboring gene zinc finger MYND-type containing 8 Neighboring gene EYA transcriptional coactivator and phosphatase 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047094.1 Chromosome 11 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein insertion into ER membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
translocating chain-associated membrane protein 1-like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047094.1 Reference aGeoSer1.1 Primary Assembly

    Range
    112493067..112579489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033963702.1 → XP_033819593.1  translocating chain-associated membrane protein 1-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P8SU66
    Conserved Domains (2) summary
    pfam03798
    Location:68 → 266
    TRAM_LAG1_CLN8; TLC domain
    pfam08390
    Location:1 → 65
    TRAM1; TRAM1-like protein

  2. XM_033963701.1 → XP_033819592.1  translocating chain-associated membrane protein 1-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P8SM30
    Conserved Domains (2) summary
    pfam03798
    Location:115 → 313
    TRAM_LAG1_CLN8; TLC domain
    pfam08390
    Location:46 → 112
    TRAM1; TRAM1-like protein

  3. XM_033963703.1 → XP_033819594.1  translocating chain-associated membrane protein 1-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P8SU66
    Conserved Domains (2) summary
    pfam03798
    Location:68 → 266
    TRAM_LAG1_CLN8; TLC domain
    pfam08390
    Location:1 → 65
    TRAM1; TRAM1-like protein

RNA

  1. XR_004541118.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases