U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117368679 galactoside 2-alpha-L-fucosyltransferase 2-like [ Geotrypetes seraphini ]

Gene ID: 117368679, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117368679
Gene description
galactoside 2-alpha-L-fucosyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117368679 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 10 NC_047093.1 (142470031..142470966)

Chromosome 10 - NC_047093.1Genomic Context describing neighboring genes Neighboring gene galactoside 2-alpha-L-fucosyltransferase 2-like Neighboring gene galactoside 2-alpha-L-fucosyltransferase 2-like Neighboring gene galactoside 2-alpha-L-fucosyltransferase 2-like Neighboring gene lysine methyltransferase 5C Neighboring gene transmembrane protein 150B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047093.1 Chromosome 10 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
galactoside 2-alpha-L-fucosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047093.1 Reference aGeoSer1.1 Primary Assembly

    Range
    142470031..142470966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033962403.1 → XP_033818294.1  galactoside 2-alpha-L-fucosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A6P8SHZ2
    Conserved Domains (1) summary
    cl16914
    Location:6 → 286
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases