U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117368084 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like [ Geotrypetes seraphini ]

Gene ID: 117368084, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117368084
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117368084 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 10 NC_047093.1 (41106161..41173360, complement)

Chromosome 10 - NC_047093.1Genomic Context describing neighboring genes Neighboring gene peripheral myelin protein 22 Neighboring gene uncharacterized LOC117367488 Neighboring gene protoheme IX farnesyltransferase, mitochondrial Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 3A1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047093.1 Chromosome 10 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047093.1 Reference aGeoSer1.1 Primary Assembly

    Range
    41106161..41173360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033961377.1 → XP_033817268.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

    UniProtKB/TrEMBL
    A0A6P8SLJ2
    Conserved Domains (1) summary
    pfam00685
    Location:125 → 366
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases