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PLA2G4A phospholipase A2 group IVA [ Geotrypetes seraphini ]

Gene ID: 117367825, updated on 19-Mar-2024

Summary

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Gene symbol
PLA2G4A
Gene description
phospholipase A2 group IVA
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See PLA2G4A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
19
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 10 NC_047093.1 (125570667..125691044, complement)

Chromosome 10 - NC_047093.1Genomic Context describing neighboring genes Neighboring gene BMP/retinoic acid inducible neural specific 3 Neighboring gene uncharacterized LOC117368509 Neighboring gene prostaglandin-endoperoxide synthase 2 Neighboring gene phosducin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047093.1 Chromosome 10 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047093.1 Reference aGeoSer1.1 Primary Assembly

    Range
    125570667..125691044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033960800.1 → XP_033816691.1  cytosolic phospholipase A2 isoform X2

    UniProtKB/TrEMBL
    A0A6P8SNY3
    Conserved Domains (2) summary
    cd07200
    Location:144 → 700
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:20 → 136
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)

  2. XM_033960799.1 → XP_033816690.1  cytosolic phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A6P8SDE8
    Conserved Domains (2) summary
    cd07200
    Location:144 → 731
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:20 → 136
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)

  3. XM_033960801.1 → XP_033816692.1  cytosolic phospholipase A2 isoform X3

    UniProtKB/TrEMBL
    A0A6P8SEK5
    Conserved Domains (2) summary
    cd07200
    Location:66 → 653
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cl14603
    Location:11 → 58
    C2; C2 domain

  4. XM_033960802.1 → XP_033816693.1  cytosolic phospholipase A2 isoform X4

    UniProtKB/TrEMBL
    A0A6P8SJU8
    Conserved Domains (1) summary
    cd07200
    Location:15 → 602
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
Nucleotide Protein
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