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CPT1C carnitine palmitoyltransferase 1C [ Geotrypetes seraphini ]

Gene ID: 117367799, updated on 19-Mar-2024

Summary

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Gene symbol
CPT1C
Gene description
carnitine palmitoyltransferase 1C
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See CPT1C in Genome Data Viewer
Location:
chromosome: 10
Exon count:
22
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 10 NC_047093.1 (121836248..121875417)

Chromosome 10 - NC_047093.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117367800 Neighboring gene uncharacterized LOC117367801 Neighboring gene testis specific serine kinase substrate Neighboring gene adaptor related protein complex 2 subunit alpha 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047093.1 Chromosome 10 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, brain isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047093.1 Reference aGeoSer1.1 Primary Assembly

    Range
    121836248..121875417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033960755.1 → XP_033816646.1  carnitine O-palmitoyltransferase 1, brain isoform isoform X1

    UniProtKB/TrEMBL
    A0A6P8SNT1
    Conserved Domains (2) summary
    pfam00755
    Location:171 → 761
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 47
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  2. XM_033960754.1 → XP_033816645.1  carnitine O-palmitoyltransferase 1, brain isoform isoform X1

    UniProtKB/TrEMBL
    A0A6P8SNT1
    Conserved Domains (2) summary
    pfam00755
    Location:171 → 761
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 47
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  3. XM_033960756.1 → XP_033816647.1  carnitine O-palmitoyltransferase 1, brain isoform isoform X2

    UniProtKB/TrEMBL
    A0A6P8SEH1
    Conserved Domains (2) summary
    pfam00755
    Location:171 → 760
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 47
    CPT_N; Carnitine O-palmitoyltransferase N-terminus
Nucleotide Protein
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