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ZBTB6 zinc finger and BTB domain containing 6 [ Geotrypetes seraphini ]

Gene ID: 117367737, updated on 19-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 10 NC_047093.1 (80122247..80150850, complement)

Chromosome 10 - NC_047093.1Genomic Context describing neighboring genes Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene uncharacterized LOC117368216 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene keratin, type I cytoskeletal 18-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047093.1 Chromosome 10 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047093.1 Reference aGeoSer1.1 Primary Assembly

    Range
    80122247..80150850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033960606.1 → XP_033816497.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6P8SJ96
    Conserved Domains (3) summary
    COG5048
    Location:226 → 401
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:330 → 350
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)

  2. XM_033960607.1 → XP_033816498.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6P8SJ96
    Conserved Domains (3) summary
    COG5048
    Location:226 → 401
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:330 → 350
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)

  3. XM_033960608.1 → XP_033816499.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6P8SJ96
    Conserved Domains (3) summary
    COG5048
    Location:226 → 401
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:330 → 350
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
Nucleotide Protein
Heading Accession and Version

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