U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

INPP5E inositol polyphosphate-5-phosphatase E [ Geotrypetes seraphini ]

Gene ID: 117367530, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
INPP5E
Gene description
inositol polyphosphate-5-phosphatase E
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See INPP5E in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 10 NC_047093.1 (62023812..62093512, complement)

Chromosome 10 - NC_047093.1Genomic Context describing neighboring genes Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene uncharacterized LOC117367533 Neighboring gene peptidase, mitochondrial processing subunit alpha Neighboring gene endosome associated trafficking regulator 1 Neighboring gene small nuclear RNA activating complex polypeptide 4 Neighboring gene caspase recruitment domain family member 9

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047093.1 Chromosome 10 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phosphatidylinositol polyphosphate 5-phosphatase type IV

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047093.1 Reference aGeoSer1.1 Primary Assembly

    Range
    62023812..62093512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033960148.1 → XP_033816039.1  phosphatidylinositol polyphosphate 5-phosphatase type IV

    UniProtKB/TrEMBL
    A0A6P8SCN8
    Conserved Domains (1) summary
    cd09095
    Location:288 → 586
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.