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SPHK2 sphingosine kinase 2 [ Geotrypetes seraphini ]

Gene ID: 117367450, updated on 19-Mar-2024

Summary

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Gene symbol
SPHK2
Gene description
sphingosine kinase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 10 NC_047093.1 (140249731..140274821, complement)

Chromosome 10 - NC_047093.1Genomic Context describing neighboring genes Neighboring gene sulfotransferase 2B1-like Neighboring gene carbonic anhydrase 11 Neighboring gene D-box binding PAR bZIP transcription factor Neighboring gene ribosomal protein L18 Neighboring gene uncharacterized LOC117367496

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047093.1 Chromosome 10 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphinganine-1-phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047093.1 Reference aGeoSer1.1 Primary Assembly

    Range
    140249731..140274821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033959992.1 → XP_033815883.1  sphingosine kinase 2

    UniProtKB/TrEMBL
    A0A6P8SH89
    Conserved Domains (1) summary
    PLN02958
    Location:162 → 566
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  2. XM_033959991.1 → XP_033815882.1  sphingosine kinase 2

    UniProtKB/TrEMBL
    A0A6P8SH89
    Conserved Domains (1) summary
    PLN02958
    Location:162 → 566
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  3. XM_033959993.1 → XP_033815884.1  sphingosine kinase 2

    UniProtKB/TrEMBL
    A0A6P8SH89
    Conserved Domains (1) summary
    PLN02958
    Location:162 → 566
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  4. XM_033959990.1 → XP_033815881.1  sphingosine kinase 2

    UniProtKB/TrEMBL
    A0A6P8SH89
    Conserved Domains (1) summary
    PLN02958
    Location:162 → 566
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  5. XM_033959989.1 → XP_033815880.1  sphingosine kinase 2

    UniProtKB/TrEMBL
    A0A6P8SH89
    Conserved Domains (1) summary
    PLN02958
    Location:162 → 566
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase
Nucleotide Protein
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