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PNPLA7 patatin like phospholipase domain containing 7 [ Geotrypetes seraphini ]

Gene ID: 117367434, updated on 19-Mar-2024

Summary

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Gene symbol
PNPLA7
Gene description
patatin like phospholipase domain containing 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
36
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 10 NC_047093.1 (104183259..105047345)

Chromosome 10 - NC_047093.1Genomic Context describing neighboring genes Neighboring gene zinc finger MYND-type containing 19 Neighboring gene diphthamide biosynthesis 7 Neighboring gene tyrosine--tRNA ligase, mitochondrial-like Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene uncharacterized LOC117368027 Neighboring gene CDK5 regulatory subunit-associated protein 2-like Neighboring gene phosducin like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047093.1 Chromosome 10 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047093.1 Reference aGeoSer1.1 Primary Assembly

    Range
    104183259..105047345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033959965.1 → XP_033815856.1  patatin-like phospholipase domain-containing protein 7

    UniProtKB/TrEMBL
    A0A6P8SKY5
    Conserved Domains (2) summary
    cd07225
    Location:887 → 1192
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:555 → 663
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
Heading Accession and Version

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