U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HS6ST1 heparan sulfate 6-O-sulfotransferase 1 [ Geotrypetes seraphini ]

Gene ID: 117367132, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
HS6ST1
Gene description
heparan sulfate 6-O-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See HS6ST1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 9 NC_047092.1 (97281818..97337127, complement)

Chromosome 9 - NC_047092.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117366513 Neighboring gene protein phosphatase 2 regulatory subunit B''alpha Neighboring gene YEATS domain containing 2 Neighboring gene presenilin associated rhomboid like Neighboring gene phosphoserine aminotransferase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047092.1 Chromosome 9 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan-sulfate 6-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047092.1 Reference aGeoSer1.1 Primary Assembly

    Range
    97281818..97337127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033959420.1 → XP_033815311.1  heparan-sulfate 6-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A6P8SIU1
    Conserved Domains (1) summary
    pfam03567
    Location:79 → 342
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.