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PCYT1A phosphate cytidylyltransferase 1A, choline [ Geotrypetes seraphini ]

Gene ID: 117367028, updated on 19-Mar-2024

Summary

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Gene symbol
PCYT1A
Gene description
phosphate cytidylyltransferase 1A, choline
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See PCYT1A in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 9 NC_047092.1 (185108299..185141132)

Chromosome 9 - NC_047092.1Genomic Context describing neighboring genes Neighboring gene programmed cell death 1 Neighboring gene tctex1 domain-containing protein 2-like Neighboring gene solute carrier family 51 member A Neighboring gene transferrin receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047092.1 Chromosome 9 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase A
Names
phosphate cytidylyltransferase 1, choline, alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047092.1 Reference aGeoSer1.1 Primary Assembly

    Range
    185108299..185141132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033959212.1 → XP_033815103.1  choline-phosphate cytidylyltransferase A isoform X2

    UniProtKB/TrEMBL
    A0A6P8SEF8
    Conserved Domains (1) summary
    PLN02413
    Location:70 → 291
    PLN02413; choline-phosphate cytidylyltransferase

  2. XM_033959211.1 → XP_033815102.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A6P8SHZ0
    Conserved Domains (1) summary
    PLN02413
    Location:70 → 307
    PLN02413; choline-phosphate cytidylyltransferase

  3. XM_033959210.1 → XP_033815101.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A6P8SHZ0
    Conserved Domains (1) summary
    PLN02413
    Location:70 → 307
    PLN02413; choline-phosphate cytidylyltransferase
Nucleotide Protein
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