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LOC117367012 UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like [ Geotrypetes seraphini ]

Gene ID: 117367012, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117367012
Gene description
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
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Genomic context

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See LOC117367012 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 9 NC_047092.1 (164855971..164877577)

Chromosome 9 - NC_047092.1Genomic Context describing neighboring genes Neighboring gene UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like Neighboring gene UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like Neighboring gene ARF like GTPase 14 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene uncharacterized LOC117366650 Neighboring gene transfer RNA glutamine (anticodon UUG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047092.1 Chromosome 9 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047092.1 Reference aGeoSer1.1 Primary Assembly

    Range
    164855971..164877577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033959173.1 → XP_033815064.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A6P8S9Y7
    Conserved Domains (1) summary
    pfam01762
    Location:81 → 274
    Galactosyl_T; Galactosyltransferase

  2. XM_033959172.1 → XP_033815063.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A6P8S9Y7
    Conserved Domains (1) summary
    pfam01762
    Location:81 → 274
    Galactosyl_T; Galactosyltransferase

  3. XM_033959175.1 → XP_033815066.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A6P8S9Y7
    Conserved Domains (1) summary
    pfam01762
    Location:81 → 274
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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