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ACADS acyl-CoA dehydrogenase short chain [ Geotrypetes seraphini ]

Gene ID: 117365280, updated on 18-Sep-2024

Summary

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Gene symbol
ACADS
Gene description
acyl-CoA dehydrogenase short chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See ACADS in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 8 NC_047091.1 (128999108..129023009)

Chromosome 8 - NC_047091.1Genomic Context describing neighboring genes Neighboring gene malectin Neighboring gene unc-119 lipid binding chaperone B Neighboring gene signal peptide peptidase like 3 Neighboring gene HNF1 homeobox A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047091.1 Chromosome 8 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in butyrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short-chain specific acyl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047091.1 Reference aGeoSer1.1 Primary Assembly

    Range
    128999108..129023009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033955502.1 → XP_033811393.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P8S1Z7
    Conserved Domains (1) summary
    cd01158
    Location:42 → 414
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases

  2. XM_033955503.1 → XP_033811394.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P8S0R0
    Conserved Domains (1) summary
    cd01158
    Location:35 → 407
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases

RNA

  1. XR_004540393.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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