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LOC117364804 proline dehydrogenase 1, mitochondrial-like [ Geotrypetes seraphini ]

Gene ID: 117364804, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117364804
Gene description
proline dehydrogenase 1, mitochondrial-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
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Genomic context

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See LOC117364804 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 8 NC_047091.1 (193384312..193541498, complement)

Chromosome 8 - NC_047091.1Genomic Context describing neighboring genes Neighboring gene protein DGCR6-like Neighboring gene scavenger receptor class F member 2 Neighboring gene reticulon 4 receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047091.1 Chromosome 8 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proline dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proline catabolic process to glutamate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline dehydrogenase 1, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047091.1 Reference aGeoSer1.1 Primary Assembly

    Range
    193384312..193541498 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033954437.1 → XP_033810328.1  proline dehydrogenase 1, mitochondrial-like isoform X2

    UniProtKB/TrEMBL
    A0A6P8RYT8
    Conserved Domains (1) summary
    PLN02681
    Location:60 → 581
    PLN02681; proline dehydrogenase

  2. XM_033954436.1 → XP_033810327.1  proline dehydrogenase 1, mitochondrial-like isoform X1

    UniProtKB/TrEMBL
    A0A6P8RXE5
    Conserved Domains (1) summary
    PLN02681
    Location:60 → 612
    PLN02681; proline dehydrogenase
Nucleotide Protein
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