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CHGA chromogranin A [ Geotrypetes seraphini ]

Gene ID: 117364172, updated on 19-Mar-2024

Summary

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Gene symbol
CHGA
Gene description
chromogranin A
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See CHGA in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 7 NC_047090.1 (174200332..174340836, complement)

Chromosome 7 - NC_047090.1Genomic Context describing neighboring genes Neighboring gene lysosomal enzyme trafficking factor Neighboring gene inositol-tetrakisphosphate 1-kinase Neighboring gene golgin A5 Neighboring gene legumain Neighboring gene uncharacterized LOC117363472

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047090.1 Chromosome 7 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of catecholamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromaffin granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromogranin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047090.1 Reference aGeoSer1.1 Primary Assembly

    Range
    174200332..174340836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033953112.1 → XP_033809003.1  chromogranin-A isoform X2

    UniProtKB/TrEMBL
    A0A6P8RUX4
    Conserved Domains (1) summary
    pfam01271
    Location:1 → 449
    Granin; Granin (chromogranin or secretogranin)

  2. XM_033953111.1 → XP_033809002.1  chromogranin-A isoform X1

    UniProtKB/TrEMBL
    A0A6P8RTV0
    Conserved Domains (1) summary
    pfam01271
    Location:25 → 473
    Granin; Granin (chromogranin or secretogranin)
Nucleotide Protein
Heading Accession and Version

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