U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117363916 LARGE xylosyl- and glucuronyltransferase 1 [ Geotrypetes seraphini ]

Gene ID: 117363916, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117363916
Gene description
LARGE xylosyl- and glucuronyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117363916 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 7 NC_047090.1 (5831413..6223185)

Chromosome 7 - NC_047090.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117363396 Neighboring gene cell cycle regulator of NHEJ Neighboring gene AGBL carboxypeptidase 3 Neighboring gene 40S ribosomal protein S25-like Neighboring gene 40S ribosomal protein S25-like Neighboring gene caldesmon 1 Neighboring gene bisphosphoglycerate mutase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047090.1 Chromosome 7 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LARGE xylosyl- and glucuronyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047090.1 Reference aGeoSer1.1 Primary Assembly

    Range
    5831413..6223185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033952487.1 → XP_033808378.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P8RT20
    Conserved Domains (3) summary
    cd06431
    Location:167 → 446
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:502 → 771
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
    cl21462
    Location:85 → 118
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

  2. XM_033952488.1 → XP_033808379.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P8RSC2
    Conserved Domains (3) summary
    cd06431
    Location:138 → 417
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:473 → 742
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
    cl21462
    Location:56 → 89
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases