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MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 [ Geotrypetes seraphini ]

Gene ID: 117363818, updated on 19-Mar-2024

Summary

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Gene symbol
MDGA2
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See MDGA2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 7 NC_047090.1 (130420466..131543442, complement)

Chromosome 7 - NC_047090.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117363409 Neighboring gene uncharacterized LOC117363546 Neighboring gene uncharacterized LOC117363819 Neighboring gene histone-lysine N-methyltransferase SETD5-like Neighboring gene ribosomal protein S29

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047090.1 Chromosome 7 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables axon guidance receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047090.1 Reference aGeoSer1.1 Primary Assembly

    Range
    130420466..131543442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033952215.1 → XP_033808106.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P8RTA8
    Conserved Domains (7) summary
    smart00408
    Location:256 → 317
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:48 → 128
    IG; Immunoglobulin
    smart00410
    Location:154 → 219
    IG_like; Immunoglobulin like
    pfam00629
    Location:748 → 920
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:441 → 518
    Ig_3; Immunoglobulin domain
    cd00096
    Location:258 → 268
    Ig; Ig strand B [structural motif]
    cl11960
    Location:349 → 424
    Ig; Immunoglobulin domain

  2. XM_033952214.1 → XP_033808105.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P8RRE0
    Conserved Domains (6) summary
    smart00408
    Location:260 → 321
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:48 → 128
    IG; Immunoglobulin
    pfam00629
    Location:752 → 924
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:445 → 522
    Ig_3; Immunoglobulin domain
    cd00096
    Location:262 → 272
    Ig; Ig strand B [structural motif]
    cl11960
    Location:353 → 428
    Ig; Immunoglobulin domain

  3. XM_033952216.1 → XP_033808107.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P8RR91
    Conserved Domains (6) summary
    smart00408
    Location:250 → 311
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:38 → 118
    IG; Immunoglobulin
    pfam00629
    Location:742 → 914
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:435 → 512
    Ig_3; Immunoglobulin domain
    cd00096
    Location:252 → 262
    Ig; Ig strand B [structural motif]
    cl11960
    Location:343 → 418
    Ig; Immunoglobulin domain
Nucleotide Protein
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