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LOC117360052 mannose-binding protein-like [ Geotrypetes seraphini ]

Gene ID: 117360052, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117360052
Gene description
mannose-binding protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
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Genomic context

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See LOC117360052 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 4 NC_047087.1 (218622794..218638964, complement)

Chromosome 4 - NC_047087.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117359932 Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene pulmonary surfactant-associated protein D-like Neighboring gene mannose-binding protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047087.1 Chromosome 4 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047087.1 Reference aGeoSer1.1 Primary Assembly

    Range
    218622794..218638964 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033943656.1 → XP_033799547.1  mannose-binding protein-like

    UniProtKB/TrEMBL
    A0A6P8QLZ3
    Conserved Domains (2) summary
    cd03591
    Location:145 → 258
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:46 → 101
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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