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TAB2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Geotrypetes seraphini ]

Gene ID: 117356936, updated on 19-Mar-2024

Summary

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Gene symbol
TAB2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See TAB2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 3 NC_047086.1 (242274910..242468000, complement)

Chromosome 3 - NC_047086.1Genomic Context describing neighboring genes Neighboring gene glycosylated integral membrane protein 1 Neighboring gene histone acetyltransferase KAT7-like Neighboring gene peptidylprolyl isomerase like 4 Neighboring gene uncharacterized LOC117356407 Neighboring gene uronyl 2-sulfotransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047086.1 Chromosome 3 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047086.1 Reference aGeoSer1.1 Primary Assembly

    Range
    242274910..242468000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033936904.1 → XP_033792795.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P8QAQ9
    Conserved Domains (5) summary
    smart00547
    Location:659 → 682
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:528 → 605
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:660 → 679
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:128 → 453
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_033936903.1 → XP_033792794.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P8Q8Y4
    Conserved Domains (5) summary
    smart00547
    Location:664 → 687
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:528 → 605
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:665 → 684
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:128 → 453
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  3. XM_033936906.1 → XP_033792797.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A6P8PXN8
    Conserved Domains (4) summary
    smart00547
    Location:590 → 613
    ZnF_RBZ; Zinc finger domain
    TIGR04523
    Location:454 → 531
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:591 → 610
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:54 → 379
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  4. XM_033936905.1 → XP_033792796.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P8R2A8
    Conserved Domains (4) summary
    smart00547
    Location:646 → 669
    ZnF_RBZ; Zinc finger domain
    TIGR04523
    Location:510 → 587
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:647 → 666
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:110 → 435
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  5. XM_033936907.1 → XP_033792798.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A6P8PXN8
    Conserved Domains (4) summary
    smart00547
    Location:590 → 613
    ZnF_RBZ; Zinc finger domain
    TIGR04523
    Location:454 → 531
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:591 → 610
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:54 → 379
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
Nucleotide Protein
Heading Accession and Version

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