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ACSS1 acyl-CoA synthetase short chain family member 1 [ Geotrypetes seraphini ]

Gene ID: 117356812, updated on 19-Mar-2024

Summary

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Gene symbol
ACSS1
Gene description
acyl-CoA synthetase short chain family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See ACSS1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 3 NC_047086.1 (321497725..321632539)

Chromosome 3 - NC_047086.1Genomic Context describing neighboring genes Neighboring gene histone H3-like centromeric protein A Neighboring gene visual system homeobox 1 Neighboring gene uncharacterized LOC117356814 Neighboring gene adipocyte plasma membrane associated protein Neighboring gene cystatin F

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047086.1 Chromosome 3 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from acetate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-coenzyme A synthetase 2-like, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047086.1 Reference aGeoSer1.1 Primary Assembly

    Range
    321497725..321632539
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033936529.1 → XP_033792420.1  acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P8Q9S2
    Conserved Domains (1) summary
    cd05966
    Location:64 → 600
    ACS; Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)

  2. XM_033936528.1 → XP_033792419.1  acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P8Q7Z8
    Conserved Domains (1) summary
    cd05966
    Location:64 → 676
    ACS; Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)
Nucleotide Protein
Heading Accession and Version

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