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B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 [ Geotrypetes seraphini ]

Gene ID: 117356686, updated on 19-Mar-2024

Summary

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Gene symbol
B3GALNT2
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See B3GALNT2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 3 NC_047086.1 (267502243..267848030, complement)

Chromosome 3 - NC_047086.1Genomic Context describing neighboring genes Neighboring gene centromere protein K-like Neighboring gene tubulin folding cofactor E Neighboring gene U1 spliceosomal RNA Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047086.1 Chromosome 3 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047086.1 Reference aGeoSer1.1 Primary Assembly

    Range
    267502243..267848030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033936244.1 → XP_033792135.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X6

    UniProtKB/TrEMBL
    A0A6P8Q931
    Conserved Domains (1) summary
    cl21608
    Location:260 → 410
    Galactosyl_T; Galactosyltransferase

  2. XM_033936247.1 → XP_033792138.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X7

    UniProtKB/TrEMBL
    A0A6P8QWW4
    Conserved Domains (1) summary
    cl21608
    Location:227 → 377
    Galactosyl_T; Galactosyltransferase

  3. XM_033936246.1 → XP_033792137.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X7

    UniProtKB/TrEMBL
    A0A6P8QWW4
    Conserved Domains (1) summary
    cl21608
    Location:227 → 377
    Galactosyl_T; Galactosyltransferase

  4. XM_033936239.1 → XP_033792130.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P8Q928
    Conserved Domains (1) summary
    cl21608
    Location:307 → 437
    Galactosyl_T; Galactosyltransferase

  5. XM_033936238.1 → XP_033792129.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P8Q768
    Conserved Domains (1) summary
    cl21608
    Location:307 → 457
    Galactosyl_T; Galactosyltransferase

  6. XM_033936245.1 → XP_033792136.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X7

    UniProtKB/TrEMBL
    A0A6P8QWW4
    Conserved Domains (1) summary
    cl21608
    Location:227 → 377
    Galactosyl_T; Galactosyltransferase

  7. XM_033936241.1 → XP_033792132.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P8PVD3
    Conserved Domains (1) summary
    cl21608
    Location:279 → 429
    Galactosyl_T; Galactosyltransferase

  8. XM_033936243.1 → XP_033792134.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X5

    UniProtKB/TrEMBL
    A0A6P8Q774
    Conserved Domains (1) summary
    cl21608
    Location:307 → 456
    Galactosyl_T; Galactosyltransferase

  9. XM_033936242.1 → XP_033792133.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A6P8QWV9
    Conserved Domains (1) summary
    cl21608
    Location:307 → 456
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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