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LPIN2 lipin 2 [ Geotrypetes seraphini ]

Gene ID: 117355433, updated on 19-Mar-2024

Summary

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Gene symbol
LPIN2
Gene description
lipin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See LPIN2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 2 NC_047085.1 (147031521..147325190, complement)

Chromosome 2 - NC_047085.1Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosomes flexible hinge domain containing 1 Neighboring gene uncharacterized LOC117355432 Neighboring gene elastin microfibril interfacer 2 Neighboring gene uncharacterized LOC117355435 Neighboring gene myomesin 1 Neighboring gene myosin regulatory light chain 2, smooth muscle minor isoform

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047085.1 Chromosome 2 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047085.1 Reference aGeoSer1.1 Primary Assembly

    Range
    147031521..147325190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033933961.1 → XP_033789852.1  phosphatidate phosphatase LPIN2 isoform X1

    UniProtKB/TrEMBL
    A0A6P8PN66
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:645 → 870
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:477 → 568
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  2. XM_033933960.1 → XP_033789851.1  phosphatidate phosphatase LPIN2 isoform X1

    UniProtKB/TrEMBL
    A0A6P8PN66
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:645 → 870
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:477 → 568
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  3. XM_033933962.1 → XP_033789853.1  phosphatidate phosphatase LPIN2 isoform X2

    UniProtKB/TrEMBL
    A0A6P8QQP1
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:645 → 867
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:477 → 568
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  4. XM_033933963.1 → XP_033789854.1  phosphatidate phosphatase LPIN2 isoform X3

    UniProtKB/TrEMBL
    A0A6P8Q0W9
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:645 → 857
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:477 → 568
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain
Nucleotide Protein
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