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LGALS1 galectin 1 [ Geotrypetes seraphini ]

Gene ID: 117353700, updated on 19-Mar-2024

Summary

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Gene symbol
LGALS1
Gene description
galectin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See LGALS1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 2 NC_047085.1 (303998810..304025903)

Chromosome 2 - NC_047085.1Genomic Context describing neighboring genes Neighboring gene SH3 domain binding protein 1 Neighboring gene pyridoxal phosphatase Neighboring gene urotensin-2 receptor-like Neighboring gene arf-GAP with dual PH domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047085.1 Chromosome 2 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047085.1 Reference aGeoSer1.1 Primary Assembly

    Range
    303998810..304025903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033929920.1 → XP_033785811.1  galectin-1

    UniProtKB/TrEMBL
    A0A6P8QGA2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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