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TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 [ Geotrypetes seraphini ]

Gene ID: 117353508, updated on 19-Mar-2024

Summary

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Gene symbol
TAB1
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See TAB1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 2 NC_047085.1 (260027619..260223042)

Chromosome 2 - NC_047085.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene synaptogyrin 1 Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene mitochondrial elongation factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047085.1 Chromosome 2 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047085.1 Reference aGeoSer1.1 Primary Assembly

    Range
    260027619..260223042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033929487.1 → XP_033785378.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A6P8QDM8
    Conserved Domains (1) summary
    cl00120
    Location:122 → 387
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_033929483.1 → XP_033785374.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P8PN33
    Conserved Domains (1) summary
    cl00120
    Location:122 → 387
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  3. XM_033929485.1 → XP_033785376.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P8QF17
    Conserved Domains (1) summary
    cl00120
    Location:121 → 386
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  4. XM_033929486.1 → XP_033785377.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A6P8P7Z7
    Conserved Domains (1) summary
    cl00120
    Location:99 → 364
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

RNA

  1. XR_004537960.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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