U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EFNA1 ephrin A1 [ Geotrypetes seraphini ]

Gene ID: 117349836, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
EFNA1
Gene description
ephrin A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See EFNA1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 16 NC_047099.1 (37089046..37108224)

Chromosome 16 - NC_047099.1Genomic Context describing neighboring genes Neighboring gene ephrin A4 Neighboring gene ephrin A3 Neighboring gene uncharacterized LOC117349837 Neighboring gene solute carrier family 50 member 1 Neighboring gene dolichyl-phosphate mannosyltransferase subunit 3, regulatory

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047099.1 Chromosome 16 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ephrin-A1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047099.1 Reference aGeoSer1.1 Primary Assembly

    Range
    37089046..37108224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033923438.1 → XP_033779329.1  ephrin-A1

    UniProtKB/TrEMBL
    A0A6P8P6P1
    Conserved Domains (1) summary
    cd10425
    Location:19 → 147
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.