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ALDOB aldolase, fructose-bisphosphate B [ Geotrypetes seraphini ]

Gene ID: 117348573, updated on 19-Mar-2024

Summary

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Gene symbol
ALDOB
Gene description
aldolase, fructose-bisphosphate B
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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See ALDOB in Genome Data Viewer
Location:
chromosome: 14
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 14 NC_047097.1 (573802..843424, complement)

Chromosome 14 - NC_047097.1Genomic Context describing neighboring genes Neighboring gene ERCC excision repair 1, endonuclease non-catalytic subunit Neighboring gene mitochondrial ribosomal protein L50 Neighboring gene glycine N-acyltransferase-like Neighboring gene glycine N-phenylacetyltransferase-like Neighboring gene olfactory receptor 1038-like Neighboring gene oxysterol binding protein Neighboring gene PAT1 homolog 1, processing body mRNA decay factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047097.1 Chromosome 14 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fructose-1-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructose-bisphosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose 1,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fructose-bisphosphate aldolase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047097.1 Reference aGeoSer1.1 Primary Assembly

    Range
    573802..843424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033920844.1 → XP_033776735.1  fructose-bisphosphate aldolase B isoform X2

    UniProtKB/TrEMBL
    A0A6P8P7A4
    Conserved Domains (1) summary
    pfam00274
    Location:22 → 371
    Glycolytic; Fructose-bisphosphate aldolase class-I

  2. XM_033920845.1 → XP_033776736.1  fructose-bisphosphate aldolase B isoform X3

    UniProtKB/TrEMBL
    A0A6P8PMF6
    Conserved Domains (1) summary
    pfam00274
    Location:15 → 364
    Glycolytic; Fructose-bisphosphate aldolase class-I

  3. XM_033920843.1 → XP_033776734.1  fructose-bisphosphate aldolase B isoform X1

    UniProtKB/TrEMBL
    A0A6P8NZV8
    Conserved Domains (1) summary
    pfam00274
    Location:31 → 380
    Glycolytic; Fructose-bisphosphate aldolase class-I
Nucleotide Protein
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