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LOC117347389 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [ Geotrypetes seraphini ]

Gene ID: 117347389, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117347389
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
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Genomic context

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See LOC117347389 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 13 NC_047096.1 (17522889..17552098)

Chromosome 13 - NC_047096.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117347094 Neighboring gene transmembrane protein 183A Neighboring gene NADH-cytochrome b5 reductase 1 Neighboring gene rab15 effector protein-like Neighboring gene adiponectin receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047096.1 Chromosome 13 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like; alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047096.1 Reference aGeoSer1.1 Primary Assembly

    Range
    17522889..17552098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033918258.1 → XP_033774149.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X2

    UniProtKB/TrEMBL
    A0A6P8NE77
    Conserved Domains (1) summary
    pfam04666
    Location:62 → 311
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_033918256.1 → XP_033774147.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X2

    UniProtKB/TrEMBL
    A0A6P8NE77
    Conserved Domains (1) summary
    pfam04666
    Location:62 → 311
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  3. XM_033918255.1 → XP_033774146.1  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A6P8PEX1
    Conserved Domains (1) summary
    pfam04666
    Location:80 → 329
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
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